Reference API

bids_atlas.datasets - Dataset tools

bids_atlas.datasets.get_AAL([target_space, ...])

Download the AAL atlas in specified target space and resolution, providing it in a BIDS-Atlas compliant manner.

bids_atlas.datasets.get_Destrieux([...])

Download the Destrieux atlas in specified target space and resolution, providing it in a BIDS-Atlas compliant manner.

bids_atlas.datasets.get_HarvardOxford([...])

Download the Harvard-Oxford atlas in specified target space and resolution, providing it in a BIDS-Atlas compliant manner.

bids_atlas.datasets.get_Talairach([...])

Download the Talairach atlas in specified target space and resolution, providing it in a BIDS-Atlas compliant manner.

bids_atlas.datasets.get_Juelich([...])

Download the Juelich atlas in specified target space and resolution, providing it in a BIDS-Atlas compliant manner.

bids_atlas.utils - Utility functions

bids_atlas.utils.check_output_path(path, atlas)

Check if the desired path to save the atlas exists and if not, create it.

bids_atlas.utils.resample_atlas_target(...)

Check if the atlas is in the desired resolution and if not resample it.

bids_atlas.utils.generate_json_sidecar_file(...)

Create .json file for the obtained atlas.